Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs7043960 chr9:115620075 A/T 6.82E-5 255 9.33 29.95 32.3 KM Plot
SARC rs7047914 chr9:115620773 A/C 7.34E-5 254 9.33 32.6 31.97 KM Plot
SARC rs7074826 chr10:80798763 C/T 8.94E-9 258 3.97 27.1 32.9 KM Plot
SARC rs7120546 chr11:40029408 A/C 2.37E-5 258 15.2 31.88 32.4 KM Plot
SARC rs7129099 chr11:71212172 A/T 1.69E-5 256 8.62 26.25 33.48 KM Plot
SARC rs71299622 chr3:52917038 G/A 0 257 31.1 33.77 2.13 KM Plot
SARC rs71299700 chr3:53000232 C/A 1.81E-14 257 30.93 35.37 1.17 KM Plot
SARC rs71301804 chr3:53073314 C/A 0 256 32.3 31.97 2.13 KM Plot
SARC rs71301808 chr3:53085577 C/G 0 258 32.3 31.97 2.13 KM Plot
SARC rs71301809 chr3:53090312 C/T 0 257 32.3 32.87 2.13 KM Plot
SARC rs71301811 chr3:53099334 T/C 0 255 31.42 33.77 2.13 KM Plot
SARC rs71301814 chr3:53117663 G/A 0 258 32.3 31.97 2.13 KM Plot
SARC rs71301815 chr3:53141306 C/T 0 251 31.93 26.53 2.13 KM Plot
SARC rs71301816 chr3:53142071 G/A 0 252 32.3 26.53 2.13 KM Plot
SARC rs7131282 chr11:70281007 T/C 6.97E-6 246 31.97 35.42 18.8 KM Plot